Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 4 curated entries in PaperBLAST's database that match '3.7.1.9' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_667: Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex (EC 2.3.1.-)
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

27% id,
92% cov

Pf6N2E2_2401: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

27% id,
91% cov

Pf6N2E2_1711: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)
is similar to:
PaperBLAST

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

28% id,
87% cov

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

27% id,
87% cov

Pf6N2E2_138: Alpha/beta hydrolase fold (EC 3.8.1.5)
is similar to:
PaperBLAST

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

28% id,
86% cov

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

29% id,
77% cov

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

25% id,
87% cov

Pf6N2E2_3773: Poly(3-hydroxyalkanoate) depolymerase
is similar to:
PaperBLAST

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

30% id,
77% cov

Pf6N2E2_1251: Similar to non-heme chloroperoxidase, sll5080 homolog
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

25% id,
93% cov

Pf6N2E2_36: Possible oxidoreductase
is similar to:
PaperBLAST

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

24% id,
88% cov

Pf6N2E2_5281: Alpha/beta hydrolase fold (EC 3.8.1.5)
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

24% id,
87% cov

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

32% id,
61% cov

Pf6N2E2_3422: Proline iminopeptidase (EC 3.4.11.5)
is similar to:
PaperBLAST

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

29% id,
63% cov

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

31% id,
45% cov

Pf6N2E2_5473: hydrolase, alpha/beta fold family
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

25% id,
64% cov

Pf6N2E2_1080: hydrolase, alpha/beta fold family
is similar to:
PaperBLAST

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens

36% id,
38% cov

Pf6N2E2_6035: alpha/beta hydrolase fold
is similar to:
PaperBLAST

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas putida

39% id,
26% cov

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.

30% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory