Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.150'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_1147: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

56% id,
89% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

46% id,
100% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

44% id,
100% cov

More...

Pf6N2E2_1834: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

39% id,
97% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

37% id,
97% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

42% id,
84% cov

More...

Pf6N2E2_1922: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

38% id,
91% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

39% id,
78% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

38% id,
78% cov

More...

Pf6N2E2_1269: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

34% id,
99% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

31% id,
98% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

31% id,
95% cov

More...

Pf6N2E2_1934: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

35% id,
96% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

34% id,
95% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

32% id,
97% cov

More...

Pf6N2E2_1840: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

34% id,
97% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

32% id,
98% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

29% id,
85% cov

Pf6N2E2_2290: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

43% id,
69% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

35% id,
80% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

35% id,
81% cov

More...

Pf6N2E2_742: 4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

28% id,
99% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

26% id,
97% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

31% id,
82% cov

More...

Pf6N2E2_1850: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

35% id,
77% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

36% id,
71% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

33% id,
66% cov

More...

Pf6N2E2_6000: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

36% id,
71% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

32% id,
70% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

31% id,
73% cov

More...

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

27% id,
97% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

27% id,
39% cov

Pf6N2E2_1046: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

29% id,
87% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

28% id,
86% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

33% id,
70% cov

More...

Pf6N2E2_1013: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

34% id,
74% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

31% id,
77% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

34% id,
69% cov

More...

Pf6N2E2_1149: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

32% id,
75% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

32% id,
70% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

30% id,
72% cov

More...

Pf6N2E2_1935: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

33% id,
73% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

29% id,
82% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

31% id,
75% cov

More...

Pf6N2E2_1835: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

31% id,
76% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

30% id,
76% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

30% id,
67% cov

More...

Pf6N2E2_5493: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

27% id,
83% cov

Q9Y232: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Homo sapiens

23% id,
42% cov

Q9WTK2: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Mus musculus

22% id,
42% cov

Pf6N2E2_888: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

33% id,
65% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

32% id,
66% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

32% id,
64% cov

More...

Pf6N2E2_3894: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

33% id,
58% cov

Pf6N2E2_1833: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

33% id,
53% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

32% id,
12% cov

Pf6N2E2_2078: hoxX-like protein
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

27% id,
63% cov

Pf6N2E2_1722: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

36% id,
42% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

41% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1344309-1345193 (frame +3) on unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus
Also see hits to annotated proteins above

53% id,
97% cov

Q9Y232: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Homo sapiens
Also see hits to annotated proteins above

25% id,
45% cov

Q9WTK2: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Mus musculus
Also see hits to annotated proteins above

25% id,
45% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory