Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_2700: Cysteine synthase (EC 2.5.1.47)
is similar to:
PaperBLAST

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

39% id,
97% cov

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

39% id,
97% cov

Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis

43% id,
67% cov

More...

Pf6N2E2_5721: Cysteine synthase B (EC 2.5.1.47)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

36% id,
98% cov

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

35% id,
99% cov

Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis

40% id,
65% cov

More...

Pf6N2E2_77: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

36% id,
94% cov

Pf6N2E2_5896: Cystathionine gamma-lyase (EC 4.4.1.1)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

36% id,
93% cov

Pf6N2E2_4958: Cystathionine gamma-synthase (EC 2.5.1.48)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

38% id,
85% cov

Pf6N2E2_1491: Cystathionine beta-lyase (EC 4.4.1.8)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

34% id,
94% cov

Pf6N2E2_3321: Ornithine cyclodeaminase (EC 4.3.1.12)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

33% id,
90% cov

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

32% id,
93% cov

CBS_APIME / Q2V0C9: Cystathionine beta-synthase; EC 4.2.1.22 from Apis mellifera
Q2V0C9: cystathionine beta-synthase (EC 4.2.1.22) from Apis mellifera

35% id,
60% cov

More...

Pf6N2E2_3165: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

26% id,
97% cov

Pf6N2E2_1562: Threonine dehydratase (EC 4.3.1.19)
is similar to:
PaperBLAST

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

27% id,
89% cov

Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster

29% id,
22% cov

CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus

36% id,
17% cov

More...

Pf6N2E2_802: Threonine dehydratase biosynthetic (EC 4.3.1.19)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

28% id,
82% cov

Pf6N2E2_3938: Threonine dehydratase biosynthetic (EC 4.3.1.19)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

29% id,
59% cov

CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus

31% id,
39% cov

CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens
CBS / P35520: cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens
P35520: cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens

31% id,
38% cov

More...

Pf6N2E2_2138: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

34% id,
31% cov

Pf6N2E2_5015: Magnesium and cobalt efflux protein CorC
is similar to:
PaperBLAST

Q3TWN3: cystathionine beta-synthase (EC 4.2.1.22) from Mus musculus

30% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory