Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_3299: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) is similar to: | PaperBLAST |
PS417_04195: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas simiae | 95% id, 100% cov |
Pf1N1B4_1110: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas fluorescens | 95% id, 100% cov |
PP_3599: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas putida | 92% id, 100% cov |
| Pf6N2E2_2747: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) is similar to: | PaperBLAST |
KDGD_ACIAD / Q6FFQ1: Probable 5-dehydro-4-deoxyglucarate dehydratase; 5-keto-4-deoxy-glucarate dehydratase; KDGDH; EC 4.2.1.41 from Acinetobacter baylyi | 29% id, 93% cov |
HSERO_RS15785: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Herbaspirillum seropedicae | 28% id, 95% cov |
B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni | 27% id, 96% cov |
| Pf6N2E2_670: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) is similar to: | PaperBLAST |
PP_3599: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas putida | 27% id, 97% cov |
HSERO_RS15785: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Herbaspirillum seropedicae | 27% id, 96% cov |
Pf1N1B4_1110: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas fluorescens | 27% id, 93% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory