Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 19 curated entries in PaperBLAST's database that match '4.3.2.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_1798: Argininosuccinate lyase (EC 4.3.2.1) is similar to:	PaperBLAST
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis	53% id, 98% cov
ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp.	42% id, 99% cov
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans	41% id, 100% cov
Q9P870: argininosuccinate lyase (EC 4.3.2.1) from Agaricus bisporus	40% id, 100% cov
ARLY_HUMAN / P04424: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Homo sapiens ASL / P04424: argininosuccinate lyase (EC 4.3.2.1) from Homo sapiens	39% id, 100% cov
ARLY_MOUSE / Q91YI0: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Mus musculus	39% id, 100% cov
arg7 / RF\|NP_595129.1: argininosuccinate lyase; EC 4.3.2.1 from Schizosaccharomyces pombe	39% id, 100% cov
ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli	39% id, 100% cov
ARLY_COLLI / Q01592: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Columba livia	38% id, 100% cov
ARLY2_ANAPL / P24058: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin II; Delta-2 crystallin; EC 4.3.2.1 from Anas platyrhynchos	38% id, 98% cov
ARLY_ANSAN / P33110: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Anser anser	37% id, 100% cov
ARLY_YEAST / P04076: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Saccharomyces cerevisiae	37% id, 100% cov
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron	33% id, 89% cov
Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis	31% id, 88% cov
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica	31% id, 85% cov
CA265_RS18485: arginosuccinate lyase (EC 4.3.2.1) from Pedobacter sp.	31% id, 83% cov
More...

Pf6N2E2_4429: Argininosuccinate lyase (EC 4.3.2.1) is similar to:	PaperBLAST
ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp.	50% id, 99% cov
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans	49% id, 100% cov
ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli	49% id, 99% cov
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis	45% id, 96% cov
Q9P870: argininosuccinate lyase (EC 4.3.2.1) from Agaricus bisporus	45% id, 96% cov
arg7 / RF\|NP_595129.1: argininosuccinate lyase; EC 4.3.2.1 from Schizosaccharomyces pombe	44% id, 98% cov
ARLY_HUMAN / P04424: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Homo sapiens ASL / P04424: argininosuccinate lyase (EC 4.3.2.1) from Homo sapiens	43% id, 99% cov
ARLY_YEAST / P04076: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Saccharomyces cerevisiae	44% id, 98% cov
ARLY_MOUSE / Q91YI0: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Mus musculus	42% id, 99% cov
ARLY2_ANAPL / P24058: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin II; Delta-2 crystallin; EC 4.3.2.1 from Anas platyrhynchos	42% id, 99% cov
ARLY_COLLI / Q01592: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Columba livia	42% id, 97% cov
ARLY_ANSAN / P33110: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Anser anser	41% id, 97% cov
CA265_RS18485: arginosuccinate lyase (EC 4.3.2.1) from Pedobacter sp.	35% id, 95% cov
Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis	36% id, 91% cov
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron	37% id, 87% cov
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica	35% id, 88% cov
More...

Pf6N2E2_2831: 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) is similar to:	PaperBLAST
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis	26% id, 82% cov

Pf6N2E2_2536: Fumarate hydratase class II (EC 4.2.1.2) is similar to:	PaperBLAST
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans	22% id, 78% cov

Pf6N2E2_4085: Aspartate ammonia-lyase (EC 4.3.1.1) is similar to:	PaperBLAST
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron	26% id, 42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory