Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 21 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_5590: Argininosuccinate synthase (EC
is similar to:

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC from Thermus thermophilus

64% id,
98% cov

ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC from Thermotoga maritima

49% id,
97% cov

S4V5K7: argininosuccinate synthase (EC from Protopterus annectens

51% id,
91% cov


Pf6N2E2_286: tRNA-specific 2-thiouridylase MnmA
is similar to:

ARG1: argininosuccinate synthase; EC from Candida albicans

41% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory