Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 1 curated entries in PaperBLAST's database that match '[LysW]-aminoadipate semialdehyde transaminase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_5326: Acetylornithine aminotransferase (EC 2.6.1.11)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

40% id,
94% cov

Pf6N2E2_5665: Succinylornithine transaminase (EC 2.6.1.81)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

41% id,
92% cov

Pf6N2E2_2395: Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

40% id,
93% cov

Pf6N2E2_373: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

36% id,
100% cov

Pf6N2E2_5269: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

37% id,
96% cov

Pf6N2E2_1623: Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

34% id,
99% cov

Pf6N2E2_3877: 4-aminobutyrate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
92% cov

Pf6N2E2_4631: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

30% id,
91% cov

Pf6N2E2_4512: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

29% id,
94% cov

Pf6N2E2_1739: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

32% id,
81% cov

Pf6N2E2_3463: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

27% id,
94% cov

Pf6N2E2_5022: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

33% id,
70% cov

Pf6N2E2_4013: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

35% id,
56% cov

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus

35% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory