Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 1 curated entries in PaperBLAST's database that match 'aminoadipate carrier protein%lysine%hydrolase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4496: Acetylornithine deacetylase (EC 3.5.1.16)
is similar to:
PaperBLAST

lysK / Q8VUS5: [L-2-aminoadipate carrier protein]-L-lysine lysine-hydrolase monomer (EC 3.5.1.130) from Thermus thermophilus

28% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory