Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4824: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

63% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

61% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

47% id,
99% cov

Pf6N2E2_1718: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

52% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

47% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

42% id,
100% cov

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

33% id,
82% cov

Pf6N2E2_3365: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

30% id,
85% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory