Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 6 curated entries in PaperBLAST's database that match 'deoxy%ribonate transporter' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 22 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_1105: Nitrate/nitrite transporter is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 42% id, 100% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 41% id, 94% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 40% id, 94% cov |
| Pf6N2E2_610: Nitrate/nitrite transporter is similar to: | PaperBLAST |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 41% id, 97% cov |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 41% id, 91% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 38% id, 93% cov |
| Pf6N2E2_2115: Major facilitator family transporter is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 40% id, 95% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 39% id, 95% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 36% id, 98% cov |
| Pf6N2E2_691: D-galactarate permease is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 40% id, 95% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 38% id, 95% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 36% id, 95% cov |
| Pf6N2E2_1312: 4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS) is similar to: | PaperBLAST |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 38% id, 96% cov |
H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila | 34% id, 94% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 33% id, 96% cov |
| Pf6N2E2_1042: Nitrate/nitrite transporter is similar to: | PaperBLAST |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 37% id, 96% cov |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 35% id, 96% cov |
H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila | 37% id, 93% cov |
| Pf6N2E2_1664: Nitrate/nitrite transporter is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 36% id, 95% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 35% id, 96% cov |
H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila | 35% id, 90% cov |
| Pf6N2E2_1678: Major facilitator family transporter is similar to: | PaperBLAST |
PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae | 31% id, 92% cov |
| Pf6N2E2_628: 2-ketogluconate transporter is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 30% id, 92% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 27% id, 93% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 27% id, 93% cov |
| Pf6N2E2_5978: Hexuronate transporter is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 27% id, 96% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 26% id, 89% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 24% id, 92% cov |
| Pf6N2E2_6017: Hexuronate transporter is similar to: | PaperBLAST |
H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila | 26% id, 94% cov |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 26% id, 95% cov |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 25% id, 95% cov |
| Pf6N2E2_3297: D-galactarate permease is similar to: | PaperBLAST |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 26% id, 95% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 25% id, 93% cov |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 24% id, 91% cov |
| Pf6N2E2_739: Putative hydroxycinnamate transporter is similar to: | PaperBLAST |
PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae | 25% id, 90% cov |
| Pf6N2E2_5056: Hexuronate transporter is similar to: | PaperBLAST |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 27% id, 83% cov |
| Pf6N2E2_1709: multidrug resistance transporter, Bcr/CflA family is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 24% id, 95% cov |
| Pf6N2E2_2916: Major facilitator family transporter is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 24% id, 86% cov |
PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae | 23% id, 86% cov |
| Pf6N2E2_1918: Major facilitator family transporter is similar to: | PaperBLAST |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 27% id, 44% cov |
| Pf6N2E2_898: putative major facilitator superfamily (MFS) transporter is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 26% id, 28% cov |
| Pf6N2E2_1159: Sialic acid transporter (permease) NanT is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 25% id, 29% cov |
| Pf6N2E2_2709: Sialic acid transporter (permease) NanT is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 25% id, 28% cov |
| Pf6N2E2_1505: Transporter, MFS superfamily is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 24% id, 29% cov |
| Pf6N2E2_1014: Nitrate/nitrite transporter is similar to: | PaperBLAST |
PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae | 69% id, 7% cov |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 56% id, 9% cov |
H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila | 40% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 22 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 848040-849422 (frame -2) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae | 25% id, 91% cov |
Lawrence Berkeley National Laboratory