Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 3 curated entries in PaperBLAST's database that match 'homoaconitase large subunit' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_63: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) is similar to: | PaperBLAST |
HACA_METJA / Q58409: Methanogen homoaconitase large subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 from Methanocaldococcus jannaschii | 34% id, 98% cov |
HACA_THET2 / Q9ZNE0: Homoaconitase large subunit; HACN; Homoaconitate hydratase; EC 4.2.1.36 from Thermus thermophilus | 33% id, 78% cov |
| Pf6N2E2_2301: Aconitate hydratase (EC 4.2.1.3) is similar to: | PaperBLAST |
HACA_THET2 / Q9ZNE0: Homoaconitase large subunit; HACN; Homoaconitate hydratase; EC 4.2.1.36 from Thermus thermophilus | 25% id, 60% cov |
| Pf6N2E2_564: Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) is similar to: | PaperBLAST |
HACA_METJA / Q58409: Methanogen homoaconitase large subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 from Methanocaldococcus jannaschii | 36% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory