Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 35 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_394: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

33% id,
97% cov

Pf6N2E2_383: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

33% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

32% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
97% cov

Pf6N2E2_5603: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
97% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

30% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

29% id,
98% cov

Pf6N2E2_1144: Probable acyl-CoA dehydrogenase (EC 1.3.99.3)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
97% cov

Pf6N2E2_5889: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
98% cov

Pf6N2E2_1181: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

31% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

30% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
99% cov

Pf6N2E2_1577: Glucose 1-dehydrogenase (EC 1.1.1.47)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
97% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
99% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

26% id,
99% cov

Pf6N2E2_5952: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

31% id,
99% cov

Pf6N2E2_1794: FIG00553873: hypothetical protein
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

31% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

28% id,
99% cov

Pf6N2E2_6050: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

30% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

30% id,
98% cov

Pf6N2E2_544: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

Pf6N2E2_1375: Multiple polyol-specific dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

Pf6N2E2_5209: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

30% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

28% id,
98% cov

Pf6N2E2_3703: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

28% id,
100% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
100% cov

Pf6N2E2_1959: Multiple polyol-specific dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
97% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
98% cov

Pf6N2E2_3704: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
96% cov

Pf6N2E2_1323: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
99% cov

Pf6N2E2_995: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
98% cov

Pf6N2E2_5967: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
97% cov

Pf6N2E2_1322: MoaE protein
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

26% id,
98% cov

Pf6N2E2_2041: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
97% cov

Pf6N2E2_1017: small molecule metabolism
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

26% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

25% id,
99% cov

Pf6N2E2_5206: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

25% id,
99% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

25% id,
98% cov

Pf6N2E2_1663: 2-keto-3-deoxy-L-fuconate dehydrogenase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

25% id,
99% cov

Pf6N2E2_937: Short-chain dehydrodenase (gene dltE)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
86% cov

Pf6N2E2_1884: oxidoreductase, short-chain dehydrogenase/reductase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
68% cov

Pf6N2E2_831: Ketoacyl reductase hetN (EC 1.3.1.-)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

25% id,
85% cov

Pf6N2E2_1257: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

28% id,
73% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
73% cov

Pf6N2E2_925: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
73% cov

Pf6N2E2_2548: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
70% cov

Pf6N2E2_1901: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

21% id,
91% cov

Pf6N2E2_3410: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
68% cov

Pf6N2E2_6087: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

26% id,
70% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

25% id,
70% cov

Pf6N2E2_5375: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
72% cov

Pf6N2E2_4832: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
68% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 27 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory