Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 27 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0890: homoserine dehydrogenase
is similar to:

DvMF_1412: homoserine dehydrogenase (EC from Desulfovibrio vulgaris

82% id,
97% cov

Ga0059261_2711: homoserine dehydrogenase (EC from Sphingomonas koreensis

40% id,
99% cov

DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC from Lactococcus lactis

39% id,
97% cov


DVU1913: aspartate kinase, monofunctional class
is similar to:

ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC; EC from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC; EC from Escherichia coli

30% id,
49% cov

AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC; EC from Arabidopsis thaliana

28% id,
46% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC; EC from Pedobacter sp.

30% id,
42% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory