Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 93 curated entries in PaperBLAST's database that match '1.1.1.35'.

These curated entries have 61 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0090: GDP-fucose synthetase
is similar to:
PaperBLAST

COLC_YERPU / G4WJD3: GDP-L-colitose synthase; EC 1.1.1.356 from Yersinia pseudotuberculosis

40% id,
98% cov

VIMSS206645: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

HCD2_DROME / O18404: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-hydroxysteroid dehydrogenase 10; 17-beta-HSD 10; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Scully protein; Type II HADH; EC 1.1.1.35; EC 1.1.1.51; EC 1.1.1.178 from Drosophila melanogaster

33% id,
96% cov

Q9I1X3: 3alpha-hydroxysteroid 3-dehydrogenase (EC 1.1.1.357); 3alpha-hydroxysteroid 3-dehydrogenase (Si-specific) (EC 1.1.1.50) from Pseudomonas aeruginosa

34% id,
90% cov

MFEA_DICDI / Q9NKW1: Peroxisomal multifunctional enzyme A; MFE-A; MFE-1; EC 1.1.1.35 from Dictyostelium discoideum

33% id,
48% cov

More...

DVU3137: oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

Q9I1X3: 3alpha-hydroxysteroid 3-dehydrogenase (EC 1.1.1.357); 3alpha-hydroxysteroid 3-dehydrogenase (Si-specific) (EC 1.1.1.50) from Pseudomonas aeruginosa

34% id,
86% cov

MFEA_DICDI / Q9NKW1: Peroxisomal multifunctional enzyme A; MFE-A; MFE-1; EC 1.1.1.35 from Dictyostelium discoideum

35% id,
46% cov

DVU0082: conserved hypothetical protein
is similar to:
PaperBLAST

Q9SZB3: farnesol dehydrogenase (NAD+) (EC 1.1.1.354) from Arabidopsis thaliana

26% id,
98% cov

DVU1784: oxidoreductase, short-chain dehydrogenase/reductase family
is similar to:
PaperBLAST

HCD2_DROME / O18404: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-hydroxysteroid dehydrogenase 10; 17-beta-HSD 10; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Scully protein; Type II HADH; EC 1.1.1.35; EC 1.1.1.51; EC 1.1.1.178 from Drosophila melanogaster

31% id,
75% cov

DVU2754: quinone oxidoreductase
is similar to:
PaperBLAST

GEDH_CARLC / B2NI93: Geraniol dehydrogenase; GeDH; Farnesol dehydrogenase; NAD(+)-farnesol dehydrogenase; EC 1.1.1.347; EC 1.1.1.354 from Carpoglyphus lactis

31% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory