Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.59'.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU2545: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis

30% id,
94% cov

DVU2885: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis

27% id,
99% cov

DVU2405: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis

33% id,
75% cov

DVU2201: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis

22% id,
92% cov

DVU2905: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis

23% id,
79% cov

DVU0353: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis

26% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory