Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.6' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU2405: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

36% id,
97% cov

DVU3137: oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

34% id,
96% cov

DVU2885: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

33% id,
97% cov

DVU2545: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

35% id,
91% cov

VIMSS206645: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

31% id,
93% cov

DVU2396: alcohol dehydrogenase
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

30% id,
91% cov

A0A150JSL8: glycerol dehydrogenase (EC 1.1.1.6) from Weizmannia coagulans

23% id,
93% cov

DVU2905: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

26% id,
95% cov

DVU2201: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

25% id,
95% cov

DVUA0098: dehydrogenase, putative
is similar to:
PaperBLAST

bedD / GB|AAC44426.1: glycerol dehydrogenase; EC 1.1.1.6 from Pseudomonas putida

28% id,
82% cov

A0A150JSL8: glycerol dehydrogenase (EC 1.1.1.6) from Weizmannia coagulans

29% id,
59% cov

GLDA_ECOLI / P0A9S5: Glycerol dehydrogenase; GDH; GLDH; (R)-aminopropanol dehydrogenase; 1,2-propanediol dehydrogenase; D-1-amino-2-propanol oxidoreductase; EC 1.1.1.6; EC 1.1.1.75 from Escherichia coli
GldA / b3945: L-1,2-propanediol dehydrogenase / glycerol dehydrogenase (EC 1.1.1.75; EC 1.1.1.6) from Escherichia coli
gldA / RF|NP_418380: glycerol dehydrogenase; EC 1.1.1.6 from Escherichia coli
gldA / P0A9S5: L-1,2-propanediol dehydrogenase / glycerol dehydrogenase (EC 1.1.1.75; EC 1.1.1.6) from Escherichia coli
P0A9S5: glycerol dehydrogenase (EC 1.1.1.6) from Escherichia coli

34% id,
48% cov

More...

DVU0353: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

GLDA_THEMA / Q9WYQ4: Glycerol dehydrogenase; GDH; GLDH; EC 1.1.1.6 from Thermotoga maritima
Q9WYQ4: glycerol dehydrogenase (EC 1.1.1.6) from Thermotoga maritima

26% id,
76% cov

GLDA_GEOSE / P32816: Glycerol dehydrogenase; GDH; GLDH; GlyDH; EC 1.1.1.6 from Geobacillus stearothermophilus
gldA / GI|142978: glycerol dehydrogenase; EC 1.1.1.6 from Geobacillus stearothermophilus
P32816: glycerol dehydrogenase (EC 1.1.1.6) from Geobacillus stearothermophilus

21% id,
91% cov

Q8ZKM9: glycerol dehydrogenase (EC 1.1.1.6) from Salmonella enterica

27% id,
41% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory