Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1378: ketol-acid reductoisomerase
is similar to:
PaperBLAST

ILVC_ALIAD / C8WR67: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Alicyclobacillus acidocaldarius
C8WR67: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Alicyclobacillus acidocaldarius

68% id,
95% cov

Q9Z565: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor
D6ERQ9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

64% id,
99% cov

ilvC / Q0KCU2: acetohydroxyacid isomeroreductase (EC 1.1.1.86) from Cupriavidus necator

65% id,
98% cov

More...

VIMSS209218: AhpF family protein/thioredoxin reductase
is similar to:
PaperBLAST

Q9Z565: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor
D6ERQ9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

28% id,
49% cov

Q59818: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces avermitilis

28% id,
49% cov

Q57179: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Corynebacterium glutamicum

26% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory