Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 7 curated entries in PaperBLAST's database that match '1.1.3.2' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU2784: dehydrogenase, FMN-dependent family
is similar to:
PaperBLAST

Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp.

49% id,
35% cov

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

47% id,
34% cov

lctO / D4YFM2: lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans
D4YFM2: L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans

40% id,
39% cov

More...

DVU1823: glutamate synthase, iron-sulfur cluster-binding subunit, putative
is similar to:
PaperBLAST

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

31% id,
26% cov

Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp.

29% id,
25% cov

DVU2064: oxidoreductase, 2-nitropropane dioxygenase family
is similar to:
PaperBLAST

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

29% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory