Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3319: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

35% id,
91% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

32% id,
96% cov

ALDH3_YEAST / P54114: Aldehyde dehydrogenase [NAD(P)+] 2; EC 1.2.1.3 from Saccharomyces cerevisiae
ALD3 / P54114: aldehyde dehydrogenase (EC 1.2.1.8; EC 1.2.1.3) from Saccharomyces cerevisiae

32% id,
95% cov

More...

DVU3294: aldehyde dehydrogenase (NADP) family protein
is similar to:
PaperBLAST

Q92UV7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sinorhizobium meliloti

30% id,
94% cov

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

30% id,
94% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

29% id,
96% cov

More...

DVU2405: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

34% id,
43% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

34% id,
43% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

29% id,
47% cov

DVU2396: alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

30% id,
45% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

30% id,
45% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

27% id,
45% cov

DVU2545: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

27% id,
48% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

31% id,
30% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

31% id,
30% cov

More...

DVU2885: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

31% id,
39% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

31% id,
39% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

35% id,
18% cov

DVU2201: alcohol dehydrogenase, iron-containing
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

25% id,
41% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

25% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory