Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 11 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3319: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
is similar to:

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC from Mus musculus

31% id,
97% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC from Burkholderia cepacia

32% id,
92% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC from Comamonas testosteroni

31% id,
94% cov


DVU3294: aldehyde dehydrogenase (NADP) family protein
is similar to:

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC from Pseudomonas sp.

29% id,
93% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC from Pseudomonas fluorescens

30% id,
90% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC from Burkholderia cepacia

28% id,
94% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory