Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 13 curated entries in PaperBLAST's database that match '1.2.7.5'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0687: aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative
is similar to:
PaperBLAST

B9MQI2: aldehyde ferredoxin oxidoreductase (subunit 2/2) (EC 1.2.7.5); glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) (subunit 2/2) (EC 1.2.7.6) from Caldicellulosiruptor bescii

41% id,
98% cov

AOR_PYRFU / Q51739: Tungsten-containing aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / RF|NP_578075.1: aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / Q51739: tungsten-containing aldehyde ferredoxin oxidoreductase monomer (EC 1.2.7.5) from Pyrococcus furiosus
Q51739: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Pyrococcus furiosus

28% id,
93% cov

B0K0E5: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Thermoanaerobacter sp.

28% id,
93% cov

More...

DVU0686: iron-sulfur cluster-binding protein
is similar to:
PaperBLAST

B9MQI1: aldehyde ferredoxin oxidoreductase (subunit 1/2) (EC 1.2.7.5); glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) (subunit 1/2) (EC 1.2.7.6) from Caldicellulosiruptor bescii

43% id,
91% cov

DVU1179: aldehyde:ferredoxin oxidoreductase, tungsten-containing
is similar to:
PaperBLAST

B0K0E5: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Thermoanaerobacter sp.

37% id,
92% cov

AOR_PYRFU / Q51739: Tungsten-containing aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / RF|NP_578075.1: aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / Q51739: tungsten-containing aldehyde ferredoxin oxidoreductase monomer (EC 1.2.7.5) from Pyrococcus furiosus
Q51739: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Pyrococcus furiosus

37% id,
92% cov

aor / Q5P143: tungsten-containing aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Aromatoleum aromaticum

33% id,
92% cov

More...

DVU0535: 40.1 kd protein in hmc operon (HmcB)
is similar to:
PaperBLAST

B9MQI1: aldehyde ferredoxin oxidoreductase (subunit 1/2) (EC 1.2.7.5); glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) (subunit 1/2) (EC 1.2.7.6) from Caldicellulosiruptor bescii

28% id,
90% cov

DVU3143: iron-sulfur cluster-binding protein
is similar to:
PaperBLAST

B9MQI1: aldehyde ferredoxin oxidoreductase (subunit 1/2) (EC 1.2.7.5); glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) (subunit 1/2) (EC 1.2.7.6) from Caldicellulosiruptor bescii

23% id,
68% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

760711-761247 (frame +1) on 1944
is similar to:
PaperBLAST

B9MQI1: aldehyde ferredoxin oxidoreductase (subunit 1/2) (EC 1.2.7.5); glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) (subunit 1/2) (EC 1.2.7.6) from Caldicellulosiruptor bescii
Also see hits to annotated proteins above

43% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory