Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 4 curated entries in PaperBLAST's database that match '1.4.1.24' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0461: predicted 3-dehydroquinate synthase
is similar to:
PaperBLAST

DHQS_METJA / Q58646: 3-dehydroquinate synthase; DHQ synthase; 3-dehydroquinate synthase II; EC 1.4.1.24 from Methanocaldococcus jannaschii
aroB' / Q58646: dehydroquinate synthase II (EC 1.4.1.24) from Methanocaldococcus jannaschii

43% id,
88% cov

DHQS_METMP / Q6M1B0: 3-dehydroquinate synthase; DHQ synthase; 3-dehydroquinate synthase II; EC 1.4.1.24 from Methanococcus maripaludis

39% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory