Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 23 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1809: L-aspartate oxidase
is similar to:
PaperBLAST

Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis

33% id,
22% cov

Q99042: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis

33% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory