Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 60 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1423: 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

53% id,
89% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

37% id,
97% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

35% id,
98% cov

More...

DVU1037: mercuric reductase, putative
is similar to:
PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

36% id,
98% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

34% id,
97% cov

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

34% id,
96% cov

More...

VIMSS209218: AhpF family protein/thioredoxin reductase
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

50% id,
60% cov

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

27% id,
69% cov

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

25% id,
69% cov

More...

DVU3212: pyridine nucleotide-disulfide oxidoreductase
is similar to:
PaperBLAST

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

26% id,
92% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

25% id,
92% cov

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

29% id,
76% cov

More...

DVU1838: thioredoxin reductase
is similar to:
PaperBLAST

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

26% id,
72% cov

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

24% id,
50% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

25% id,
46% cov

More...

DVU3292: pyridine nucleotide-disulfide oxidoreductase
is similar to:
PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

30% id,
44% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

30% id,
42% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

30% id,
42% cov

DVU1457: thioredoxin reductase, putative
is similar to:
PaperBLAST

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

25% id,
39% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

27% id,
18% cov

DVU0848: Quinone-interacting membrane-bound oxidoreductase
is similar to:
PaperBLAST

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

32% id,
19% cov

DLDH_PEA / P31023: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; Pyruvate dehydrogenase complex E3 subunit; E3; PDC-E3; EC 1.8.1.4 from Pisum sativum

35% id,
10% cov

DLDH_MESAU / Q811C4: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Mesocricetus auratus

35% id,
10% cov

More...

DVU0377: thioredoxin reductase
is similar to:
PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

36% id,
14% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

27% id,
16% cov

DVU2072: chemotaxis protein CheA
is similar to:
PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

39% id,
13% cov

DVU0637: conserved hypothetical protein
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

46% id,
9% cov

DVU2402: heterodisulfide reductase, A subunit
is similar to:
PaperBLAST

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

33% id,
10% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

50% id,
7% cov

DVU3132: glycerol-3-phosphate dehydrogenase, FAD-dependent
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

42% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

706110-707774 (frame +3) on 1944
is similar to:
PaperBLAST

DLDH2_ARATH / Q9M5K2: Dihydrolipoyl dehydrogenase 2, mitochondrial; AtmLPD2; mtLPD2; Dihydrolipoamide dehydrogenase 2; Glycine cleavage system L protein 2; Pyruvate dehydrogenase complex E3 subunit 2; E3-2; PDC-E3 2; EC 1.8.1.4 from Arabidopsis thaliana
Q9M5K2: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Arabidopsis thaliana
Also see hits to annotated proteins above

26% id,
44% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae
Also see hits to annotated proteins above

37% id,
14% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory