Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 21 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1585: vitamin B12-dependent methionine synthase family protein
is similar to:

DVU1585: Methionine synthase (cobalamin-dependent) (EC from Desulfovibrio vulgaris

100% id,
100% cov

DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC from Desulfovibrio vulgaris

76% id,
100% cov

PGA1_c13350 / I7EYQ6: methionine synthase B12-binding subunit (EC from Phaeobacter inhibens
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC: from Phaeobacter inhibens

39% id,
85% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory