Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 26 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3371: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
is similar to:

MetE / b3829: cobalamin-independent homocysteine transmethylase (EC from Escherichia coli
metE: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC from Escherichia coli
metE / P25665: cobalamin-independent homocysteine transmethylase (EC from Escherichia coli
P25665: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC from Escherichia coli

51% id,
99% cov

metH: cobalamin-independent methionine synthase; EC from Emericella nidulans

47% id,
99% cov

METE_SCHPO / Q9UT19: Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; EC from Schizosaccharomyces pombe
met26 / RF|NP_593352.1: homocysteine methyltransferase Met26; EC from Schizosaccharomyces pombe

46% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory