Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 35 curated entries in PaperBLAST's database that match '2.3.1.1' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1587: acetyltransferase, GNAT family
is similar to:
PaperBLAST

DVU1587: N-acetylglutamate synthase (EC 2.3.1.1) from Desulfovibrio vulgaris

100% id,
100% cov

ARGA_MYCTU / O33289: Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS; EC 2.3.1.1 from Mycobacterium tuberculosis
O33289: amino-acid N-acetyltransferase (EC 2.3.1.1) from Mycobacterium tuberculosis

35% id,
70% cov

DVU0823: arginine biosynthesis bifunctional protein ArgJ
is similar to:
PaperBLAST

ARGJ_THENN / Q9Z4S1: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Thermotoga neapolitana

43% id,
99% cov

ARGJ_HALH5 / Q9K8V3: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Halalkalibacterium halodurans

40% id,
96% cov

ARGJ_GEOSE / Q07908: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Geobacillus stearothermophilus

40% id,
96% cov

More...

DVU1466: acetylglutamate kinase
is similar to:
PaperBLAST

Q87EL2: amino-acid N-acetyltransferase (EC 2.3.1.1) from Xylella fastidiosa

30% id,
63% cov

Q0ASS9: amino-acid N-acetyltransferase (EC 2.3.1.1); acetylglutamate kinase (EC 2.7.2.8) from Maricaulis maris

31% id,
60% cov

N515DRAFT_3768: N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) from Dyella japonica

28% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1545708-1546646 (frame -2) on 1944
is similar to:
PaperBLAST

Q0ASS9: amino-acid N-acetyltransferase (EC 2.3.1.1); acetylglutamate kinase (EC 2.7.2.8) from Maricaulis maris
Also see hits to annotated proteins above

31% id,
63% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory