Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 26 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3029: phosphate acetyltransferase
is similar to:
PaperBLAST

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

57% id,
99% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

50% id,
98% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Hungateiclostridium thermocellum

48% id,
99% cov

More...

DVU0627: phosphotransbutyrylase
is similar to:
PaperBLAST

CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima

36% id,
97% cov

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

27% id,
92% cov

EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli
YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli
eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli

27% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3155577-3156749 (frame +3) on 1944
is similar to:
PaperBLAST

C1DER7: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii
Also see hits to annotated proteins above

30% id,
51% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory