Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 28 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3029: phosphate acetyltransferase
is similar to:

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC from Corynebacterium glutamicum

57% id,
99% cov

pta / P71103: phosphate acetyltransferase (EC from Clostridium acetobutylicum

50% id,
98% cov

O52593: phosphate acetyltransferase (EC from Acetivibrio thermocellus

48% id,
99% cov


DVU0627: phosphotransbutyrylase
is similar to:

CH_090885: phosphate acetyltransferase; EC from Thermotoga maritima

36% id,
97% cov

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC from Salmonella enterica

27% id,
92% cov

EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC from Escherichia coli
YpfA / b2458: phosphate acetyltransferase EutD (EC from Escherichia coli
eutD / P77218: phosphate acetyltransferase EutD (EC from Escherichia coli

27% id,
93% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3155577-3156749 (frame +3) on 1944
is similar to:

C1DER7: phosphate acetyltransferase (EC from Azotobacter vinelandii
Also see hits to annotated proteins above

30% id,
51% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory