Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 35 curated entries in PaperBLAST's database that match '2.3.3.9' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0701: malate synthase G
is similar to:
PaperBLAST

MASZ_MYCTO / P9WK16: Malate synthase G; EC 2.3.3.9 from Mycobacterium tuberculosis
MASZ_MYCTU / P9WK17: Malate synthase G; EC 2.3.3.9 from Mycobacterium tuberculosis
glcB / P9WK17: malate synthase G (EC 2.3.3.9) from Mycobacterium tuberculosis
P9WK17: malate synthase (EC 2.3.3.9) from Mycobacterium tuberculosis

59% id,
98% cov

Psest_0354: Malate synthase G (EC 2.3.3.9) from Pseudomonas stutzeri

58% id,
100% cov

MASZ_MYCLB / B8ZSN3: Malate synthase G; EC 2.3.3.9 from Mycobacterium leprae

56% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory