Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

VIMSS207269: glycosyl transferase, group 1 family protein
is similar to:		 PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

 27% id,
35% cov

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

 26% id,
24% cov

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

 29% id,
21% cov

More...

DVUA0054: glycosyl transferase, group 1 family protein
is similar to:		 PaperBLAST

CAA04512.1: sucrose synthase 2 (Sus2) (EC 2.4.1.13)
O24301: sucrose synthase (EC 2.4.1.13) from Pisum sativum

 23% id,
25% cov

SUS1_ARATH / P49040: Sucrose synthase 1; AtSUS1; Sucrose-UDP glucosyltransferase 1; EC 2.4.1.13 from Arabidopsis thaliana
NP_197583.1: sucrose synthase 1 (Sus1;AtSus1;At5g20830) (EC 2.4.1.13)
SUS1 / P49040: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana
P49040: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

 23% id,
24% cov

BAB20799.1: sucrose synthase 1 (Sus1;PypSUS1) (EC 2.4.1.13)

 21% id,
25% cov

More...

DVUA0081: glycosyl transferase, group 1/2 family protein
is similar to:		 PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

 26% id,
21% cov

DVUA0071: glycosyl transferase, group 1/2 family protein
is similar to:		 PaperBLAST

AAN76498.1: sucrose synthase (EC 2.4.1.13)

 29% id,
16% cov

BAA88905.1: sucrose synthase (CitSUS1) (EC 2.4.1.13)

 28% id,
16% cov

BAA89049.1: sucrose synthase (CitSUS1-2) (EC 2.4.1.13)

 28% id,
16% cov

More...

DVU0328: glycosyl transferase, group 1 family protein
is similar to:		 PaperBLAST

SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus
BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)

 25% id,
17% cov

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

 24% id,
17% cov

BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)

 24% id,
14% cov

More...

DVU3192: glycosyl transferase, group 1 family protein
is similar to:		 PaperBLAST

BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)

 33% id,
7% cov

DVU3221: sensor histidine kinase
is similar to:		 PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

 45% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory