Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 197 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0114: ATP phosphoribosyltransferase
is similar to:		 PaperBLAST

DVU0114: ATP phosphoribosyltransferase (EC 2.4.2.17) from Desulfovibrio vulgaris

 100% id,
100% cov

DvMF_1963: ATP phosphoribosyltransferase (EC 2.4.2.17) from Desulfovibrio vulgaris

 88% id,
100% cov

Q9Z472: ATP phosphoribosyltransferase (EC 2.4.2.17) from Corynebacterium glutamicum

 33% id,
96% cov

More...

DVU2230: purine nucleoside phosphorylase
is similar to:		 PaperBLAST

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC 2.4.2.1 from Geobacillus stearothermophilus
P77834: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus

 50% id,
99% cov

A0A3G5E8S8: purine-nucleoside phosphorylase (EC 2.4.2.1) from Aneurinibacillus migulanus

 50% id,
94% cov

Q72L69: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus

 47% id,
99% cov

More...

DVU0161: amidophosphoribosyltransferase
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 49% id,
95% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 51% id,
80% cov

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 51% id,
79% cov

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DVU1677: triosephosphate isomerase
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 42% id,
94% cov

DVU2943: orotate phosphoribosyltransferase
is similar to:		 PaperBLAST

P9WHK9: orotate phosphoribosyltransferase (EC 2.4.2.10) from Mycobacterium tuberculosis

 42% id,
96% cov

Q8DTV2: orotate phosphoribosyltransferase (EC 2.4.2.10) from Streptococcus mutans

 30% id,
87% cov

Q5SHI8: orotate phosphoribosyltransferase (EC 2.4.2.10) from Thermus thermophilus

 32% id,
80% cov

More...

DVU1807: nicotinate-nucleotide pyrophosphorylase
is similar to:		 PaperBLAST

Q5XBL7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes

 41% id,
96% cov

NADC_ECOLI / P30011: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Escherichia coli
NadC / b0109: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli
nadC: nicotinate-nucleotide diphosphorylase, carboxylating; EC 2.4.2.19 from Escherichia coli
nadC / P30011: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli

 41% id,
93% cov

Q1J647: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes

 41% id,
93% cov

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DVU0467: anthranilate phosphoribosyltransferase
is similar to:		 PaperBLAST

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

 41% id,
91% cov

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

 42% id,
84% cov

Q9YGB4: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Thermococcus kodakarensis

 35% id,
97% cov

More...

DVU0365: conserved hypothetical protein
is similar to:		 PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

 34% id,
100% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 29% id,
89% cov

LACC1_HUMAN / Q8IV20: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Homo sapiens

 26% id,
55% cov

DVU3156: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 32% id,
48% cov

PUR1_DROME / Q27601: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; Phosphoribosylamidotransferase; PRAT; EC 2.4.2.14 from Drosophila melanogaster

 26% id,
57% cov

PUR1_RAT / P35433: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; EC 2.4.2.14 from Rattus norvegicus

 27% id,
51% cov

More...

DVU0466: anthranilate synthase, glutamine amidotransferase component
is similar to:		 PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 42% id,
34% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 42% id,
34% cov

DVU0364: para-aminobenzoate/anthranilate synthase glutamine amidotransferase
is similar to:		 PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 37% id,
34% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 36% id,
34% cov

DVU3014: asparagine synthetase, glutamine-hydrolyzing
is similar to:		 PaperBLAST

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 29% id,
35% cov

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 25% id,
38% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 30% id,
25% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1871643-1872551 (frame +3) on 1944
is similar to:		 PaperBLAST

Q5XBL7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes
Also see hits to annotated proteins above

 40% id,
97% cov

Q1J647: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes
Also see hits to annotated proteins above

 40% id,
94% cov

3311452-3313428 (frame +1) on 1944
is similar to:		 PaperBLAST

PUR1_DROME / Q27601: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; Phosphoribosylamidotransferase; PRAT; EC 2.4.2.14 from Drosophila melanogaster
Also see hits to annotated proteins above

 26% id,
62% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana
Also see hits to annotated proteins above

 27% id,
49% cov

3128421-3130667 (frame +3) on 1944
is similar to:		 PaperBLAST

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana
Also see hits to annotated proteins above

 28% id,
37% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory