Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 108 curated entries in PaperBLAST's database that match '2.4.2.2'.

These curated entries have 73 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0726: queuine tRNA-ribosyltransferase
is similar to:
PaperBLAST

tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile

58% id,
99% cov

TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli
Tgt: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
tgt / P0A847: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
P0A847: tRNA-guanosine34 transglycosylase (EC 2.4.2.29) from Escherichia coli

53% id,
98% cov

Q54177: tRNA-guanosine34 transglycosylase (EC 2.4.2.29) from Shigella flexneri

53% id,
98% cov

More...

DVU1066: xanthine-guanine phosphoribosyltransferase
is similar to:
PaperBLAST

XGPT_ECOLI / P0A9M5: Xanthine-guanine phosphoribosyltransferase; XGPRT; Xanthine phosphoribosyltransferase; EC 2.4.2.-; EC 2.4.2.22 from Escherichia coli
Gxu / b0238: xanthine-guanine phsophoribosyltransferase (EC 2.4.2.8; EC 2.4.2.22) from Escherichia coli
gpt / GB|AAN41945.1: xanthine phosphoribosyltransferase; EC 2.4.2.22 from Shigella sonnei
gpt / P0A9M5: xanthine-guanine phsophoribosyltransferase (EC 2.4.2.8; EC 2.4.2.22) from Escherichia coli

56% id,
95% cov

DVU3279: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
is similar to:
PaperBLAST

cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica

45% id,
98% cov

cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum

42% id,
99% cov

COBT_SALTY / Q05603: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase; EC 2.4.2.21 from Salmonella typhimurium
cobT / Q05603: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Salmonella typhimurium
Q05603: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Salmonella enterica

39% id,
96% cov

More...

DVU1588: hypoxanthine phosphoribosyltransferase
is similar to:
PaperBLAST

HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus

40% id,
96% cov

HGXR_TOXGO / Q26997: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Toxoplasma gondii

36% id,
76% cov

HGXR_PLAFG / P20035: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Plasmodium falciparum

37% id,
74% cov

DVU0365: conserved hypothetical protein
is similar to:
PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli

34% id,
100% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

29% id,
89% cov

LACC1_HUMAN / Q8IV20: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Homo sapiens

26% id,
55% cov

DVU2230: purine nucleoside phosphorylase
is similar to:
PaperBLAST

MTAP_PYRFU / Q8U4Q8: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; PfMTAP; EC 2.4.2.28 from Pyrococcus furiosus
Q8U4Q8: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Pyrococcus furiosus

31% id,
93% cov

Q9CQ65: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Mus musculus

27% id,
88% cov

MTAP_BOVIN / Q3MHF7: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Bos taurus

25% id,
91% cov

More...

DVU2422: nitroreductase family protein
is similar to:
PaperBLAST

D7GJ95: 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii

30% id,
27% cov

DVU2764: nitroreductase family protein
is similar to:
PaperBLAST

D7GJ95: 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii

37% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3305019-3305360 (frame +3) on 1944
is similar to:
PaperBLAST

XYLT1_HUMAN / Q86Y38: Xylosyltransferase 1; Peptide O-xylosyltransferase 1; Xylosyltransferase I; XT-I; XylT-I; EC 2.4.2.26 from Homo sapiens
CAD62248.1: peptide O-β-xylosyltransferase I (XT-I;XylT1;XYLT1) (EC 2.4.2.26) from
XYLT1 / Q86Y38: xylosyltransferase 1 (EC 2.4.2.26) from Homo sapiens
Q86Y38: protein xylosyltransferase (EC 2.4.2.26) from Homo sapiens

42% id,
7% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory