Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
| DVU0565: glyceraldehyde 3-phosphate dehydrogenase is similar to: | PaperBLAST |
TYPH_LACRH / P19663: Thymidine phosphorylase; TdRPase; EC 2.4.2.4 from Lacticaseibacillus rhamnosus | 67% id, 91% cov |
| DVU2230: purine nucleoside phosphorylase is similar to: | PaperBLAST |
MTIP_PSEAE / Q9HZK1: S-methyl-5'-thioinosine phosphorylase; 5'-methylthioinosine phosphorylase; MTI phosphorylase; MTIP; EC 2.4.2.44 from Pseudomonas aeruginosa | 27% id, 98% cov |
| DVU0635: dolichyl-phosphate-mannose-protein mannosyltransferase family protein is similar to: | PaperBLAST |
ARNT_SALTY / O52327: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein PmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase; EC 2.4.2.43 from Salmonella typhimurium | 26% id, 74% cov |
AAL34393.1: 4-amino-4-deoxy-L-arabinotransferase (ArnT) (EC 2.4.2.43) | 26% id, 74% cov |
| DVU0726: queuine tRNA-ribosyltransferase is similar to: | PaperBLAST |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 29% id, 66% cov |
ATGT_PYRFU / Q8TH08: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Pyrococcus furiosus | 26% id, 60% cov |
ATGT_PYRHO / O58843: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Pyrococcus horikoshii | 27% id, 57% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 141271-141699 (frame -3) on 1945 is similar to: | PaperBLAST |
neoM / Q53U09: neamine phosphoribosyltransferase (EC 2.4.2.49) from Streptomyces fradiae | 38% id, 14% cov |
Lawrence Berkeley National Laboratory