Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 26 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1624: 2-dehydro-3-deoxyphosphooctonate aldolase
is similar to:

Q8U0A9: 3-deoxy-7-phosphoheptulonate synthase (EC from Pyrococcus furiosus

32% id,
90% cov

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC from Aeropyrum pernix

32% id,
86% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC from Thermotoga maritima

33% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory