Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 28 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1624: 2-dehydro-3-deoxyphosphooctonate aldolase
is similar to:

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC from Aeropyrum pernix

32% id,
86% cov

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC from uncultured bacterium

32% id,
83% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC from Thermotoga maritima

33% id,
69% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory