Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 22 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1029: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

DVU1029: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

100% id,
100% cov

DvMF_0908: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

75% id,
97% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

37% id,
99% cov

More...

DVU0891: aminotransferase, classes I and II
is similar to:
PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

25% id,
91% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

24% id,
86% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

24% id,
86% cov

DVU1655: aminotransferase, classes I and II
is similar to:
PaperBLAST

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

27% id,
82% cov

HP15_2427: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Marinobacter adhaerens

24% id,
93% cov

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

28% id,
75% cov

More...

DVU1059: aminotransferase, putative
is similar to:
PaperBLAST

DvMF_0908: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

26% id,
86% cov

P9WML7: histidinol-phosphate transaminase (EC 2.6.1.9) from Mycobacterium tuberculosis

25% id,
53% cov

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

30% id,
42% cov

DVU3223: aspartate aminotransferase
is similar to:
PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

26% id,
84% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

26% id,
85% cov

P9WML7: histidinol-phosphate transaminase (EC 2.6.1.9) from Mycobacterium tuberculosis

25% id,
84% cov

More...

DVU0392: aromatic aminotransferase
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

26% id,
81% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

29% id,
68% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

35% id,
42% cov

DVU0841: aspartate aminotransferase, putative
is similar to:
PaperBLAST

HIS8_THEMA / Q9X0D0: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Thermotoga maritima

26% id,
60% cov

2f8jA / Q9X0D0: Crystal structure of histidinol-phosphate aminotransferase (ec 2.6.1.9) (imidazole acetol-phosphate transferase) (tm1040) from thermotoga maritima at 2.40 a resolution

26% id,
60% cov

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

30% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory