Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 15 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0892: shikimate kinase
is similar to:

Q8NMT0: gluconokinase (EC from Corynebacterium glutamicum

28% id,
97% cov

DVU1028: cytidylate kinase
is similar to:

Psest_2123: fusion of gluconokinase (EC and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri

31% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory