Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.13'.

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU2468: tetraacyldisaccharide 4-kinase
is similar to:
PaperBLAST

O67572: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Aquifex aeolicus

29% id,
95% cov

LPXK_ARATH / Q8LEA0: Probable tetraacyldisaccharide 4'-kinase, mitochondrial; Protein LIPID X 4'-kinase; AtLpxK; EC 2.7.1.130 from Arabidopsis thaliana

28% id,
79% cov

LPXK_ECOLI / P27300: Tetraacyldisaccharide 4'-kinase; Lipid A 4'-kinase; EC 2.7.1.130 from Escherichia coli
YcaH / b0915: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli
lpxK / P27300: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli
P27300: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli

37% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1891979-1892266 (frame +2) on 1944
is similar to:
PaperBLAST

P54674: phosphatidylinositol 3-kinase (EC 2.7.1.137) from Dictyostelium discoideum

27% id,
5% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory