Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 13 curated entries in PaperBLAST's database that match '2.7.1.92' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0988: carbohydrate kinase, PfkB family
is similar to:
PaperBLAST

PGA1_c07240: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) from Phaeobacter inhibens

29% id,
49% cov

DVU3361: ADP-heptose synthase, putative
is similar to:
PaperBLAST

PGA1_c07240: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) from Phaeobacter inhibens

29% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory