Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 17 curated entries in PaperBLAST's database that match '2.7.2.15' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0723: phosphoribosylglycinamide formyltransferase 2
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

65% id,
100% cov

DVU3030: acetate kinase
is similar to:
PaperBLAST

ackA / A0A7H4L412: acetate kinase (EC 2.7.2.15) from Desulfovibrio sp.

64% id,
100% cov

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

53% id,
100% cov

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

49% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory