Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 15 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0723: phosphoribosylglycinamide formyltransferase 2
is similar to:

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli

65% id,
100% cov

DVU3030: acetate kinase
is similar to:

ackA / E3PRH0: acetate kinase (EC from Acetoanaerobium sticklandii

53% id,
100% cov

ackA / P71104: acetate kinase monomer (EC from Clostridium acetobutylicum

49% id,
99% cov

AckA / b2296: acetate kinase (EC; EC; EC; EC from Escherichia coli
ackA / P0A6A3: acetate kinase (EC; EC from Escherichia coli

48% id,
97% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory