Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1283: UTP-glucose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

48% id,
99% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

48% id,
98% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

42% id,
93% cov

More...

DVU2322: UTP--glucose-1-phosphate uridylyltransferase, putative
is similar to:
PaperBLAST

UGP1 / P32861: UDP-glucose pyrophosphorylase subunit (EC 2.7.7.64) from Saccharomyces cerevisiae

39% id,
82% cov

UGP / Q9M9P3: UDP-glucose pyrophosphorylase (EC 2.7.7.64) from Arabidopsis thaliana

37% id,
85% cov

A8BJJ7: UTP-monosaccharide-1-phosphate uridylyltransferase (EC 2.7.7.64); UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Giardia intestinalis

33% id,
92% cov

More...

DVU0925: glucose-1-phosphate thymidylyltransferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

30% id,
95% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

25% id,
80% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

44% id,
18% cov

More...

DVU0072: glucose-1-phosphate cytidylyl-transferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

45% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2417191-2418747 (frame +1) on 1944
is similar to:
PaperBLAST

UGP1 / P32861: UDP-glucose pyrophosphorylase subunit (EC 2.7.7.64) from Saccharomyces cerevisiae
Also see hits to annotated proteins above

37% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory