Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 138 curated entries in PaperBLAST's database that match '3.1.3.3'.

These curated entries have 107 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1539: fructose-1,6-bisphosphatase, class II
is similar to:
PaperBLAST

Q8DJE9: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Thermosynechococcus vestitus

41% id,
97% cov

FBSB_SYNE7 / Q31QY2: D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase; FBPase class 2/SBPase; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2; Fructose-1,6-bisphosphatase F-I; EC 3.1.3.11; EC 3.1.3.37 from Synechococcus elongatus
Q31QY2: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechococcus elongatus

40% id,
99% cov

slr2094 / P73922: fructose bisphosphatase F-I monomer (EC 3.1.3.11; EC 3.1.3.37) from Synechocystis sp.
P73922: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechocystis sp.

40% id,
97% cov

More...

DVU1841: fructose-1,6-bisphosphatase
is similar to:
PaperBLAST

A8IRK4: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

30% id,
73% cov

P46284: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

30% id,
73% cov

P46283: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Arabidopsis thaliana

30% id,
68% cov

More...

DVUA0099: HAMP domain protein
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

29% id,
72% cov

DVU3147: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase
is similar to:
PaperBLAST

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

28% id,
72% cov

DVU1451: response regulator
is similar to:
PaperBLAST

O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

27% id,
73% cov

DVU2935: phosphoglycerate mutase
is similar to:
PaperBLAST

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

34% id,
54% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

30% id,
50% cov

SHB17_YEAST / P36136: Sedoheptulose 1,7-bisphosphatase; EC 3.1.3.37 from Saccharomyces cerevisiae

32% id,
39% cov

DVU1093: HAD-superfamily hydrolase, subfamily IA, variant 3
is similar to:
PaperBLAST

PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus

30% id,
60% cov

DVU0339: D-isomer specific 2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

31% id,
44% cov

DVU1412: D-isomer specific 2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

28% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1911444-1912685 (frame -2) on 1944
is similar to:
PaperBLAST

A8IRK4: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii
Also see hits to annotated proteins above

29% id,
95% cov

P46284: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii
Also see hits to annotated proteins above

28% id,
95% cov

1481636-1482655 (frame -3) on 1944
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis
Also see hits to annotated proteins above

27% id,
50% cov

20544-21032 (frame -1) on 1945
is similar to:
PaperBLAST

SYNJ1_HUMAN / O43426: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Homo sapiens
SYNJ1 / O43426: synaptojanin 1 (EC 3.1.3.56; EC 3.1.3.86; EC 3.1.3.36) from Homo sapiens

35% id,
6% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory