Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 51 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).
These curated entries have 38 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
DVUA0099: HAMP domain protein is similar to: | PaperBLAST |
RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis | 29% id, 72% cov |
DVU3147: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase is similar to: | PaperBLAST |
SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana | 28% id, 72% cov |
DVU1451: response regulator is similar to: | PaperBLAST |
O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis | 27% id, 73% cov |
DVU2935: phosphoglycerate mutase is similar to: | PaperBLAST |
PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus | 34% id, 54% cov |
SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana | 30% id, 50% cov |
DVU1093: HAD-superfamily hydrolase, subfamily IA, variant 3 is similar to: | PaperBLAST |
PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus | 30% id, 60% cov |
DVU0339: D-isomer specific 2-hydroxyacid dehydrogenase family protein is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 31% id, 44% cov |
DVU1412: D-isomer specific 2-hydroxyacid dehydrogenase family protein is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 28% id, 47% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1481636-1482655 (frame -3) on 1944 is similar to: | PaperBLAST |
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis | 27% id, 50% cov |
Lawrence Berkeley National Laboratory