Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 12 curated entries in PaperBLAST's database that match '3.5.1.94'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0364: para-aminobenzoate/anthranilate synthase glutamine amidotransferase
is similar to:
PaperBLAST

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

30% id,
62% cov

DVU1043: GMP synthase
is similar to:
PaperBLAST

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

26% id,
63% cov

Sama_0794: gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94) from Shewanella amazonensis

28% id,
53% cov

DVU1623: CTP synthase
is similar to:
PaperBLAST

BWI76_RS10705: Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Klebsiella michiganensis

44% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory