Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 20 curated entries in PaperBLAST's database that match '3.5.3.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0421: agmatinase, putative
is similar to:
PaperBLAST

SPEBH_THEKO / Q5JI38: N(1)-aminopropylagmatine ureohydrolase; Agmatinase; Protein SpeB homolog; EC 3.5.3.24; EC 3.5.3.11 from Thermococcus kodakarensis

34% id,
97% cov

AGMT_PYRHO / O57839: Agmatinase; EC 3.5.3.11 from Pyrococcus horikoshii

32% id,
98% cov

speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis

30% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory