Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 37 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3156: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
is similar to:

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC from Phaeobacter inhibens

33% id,
97% cov

Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC from Sphingomonas koreensis

33% id,
95% cov

CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC from Caulobacter crescentus

33% id,
89% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory