Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
| DVU2566: diaminopimelate decarboxylase is similar to: | PaperBLAST |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 23% id, 86% cov |
A8J7E8: ornithine decarboxylase (EC 4.1.1.17) from Chlamydomonas reinhardtii | 26% id, 61% cov |
| DVU1647: diaminopimelate decarboxylase is similar to: | PaperBLAST |
Q58P26: ornithine decarboxylase (EC 4.1.1.17) from Entamoeba histolytica | 25% id, 78% cov |
DCOR1_DROME / P40807: Ornithine decarboxylase 1; ODC; EC 4.1.1.17 from Drosophila melanogaster | 22% id, 89% cov |
| DVU0419: carboxynorspermidine decarboxylase is similar to: | PaperBLAST |
DCOR_TRYBB / P07805: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Trypanosoma brucei | 25% id, 54% cov |
| DVUA0063: Orn/DAP/Arg family decarboxylase is similar to: | PaperBLAST |
DCOR_HUMAN / P11926: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Homo sapiens | 28% id, 39% cov |
W5Q1G7: ornithine decarboxylase (EC 4.1.1.17) from Ovis aries | 28% id, 39% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2678817-2680352 (frame -2) on 1944 is similar to: | PaperBLAST |
Q54UF3: ornithine decarboxylase (EC 4.1.1.17) from Dictyostelium discoideum | 24% id, 75% cov |
A8J7E8: ornithine decarboxylase (EC 4.1.1.17) from Chlamydomonas reinhardtii | 25% id, 72% cov |
Lawrence Berkeley National Laboratory