Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 10 curated entries in PaperBLAST's database that match '4.1.2.17'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0158: conserved hypothetical protein TIGR00104
is similar to:
PaperBLAST

FUCA_ECOLI / P0AB87: L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli
Prd / b2800: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli
fucA / P0AB87: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli
P0AB87: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli

30% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory