Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 90 curated entries in PaperBLAST's database that match '4.1.2.4'.
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
| DVU1203: serine hydroxymethyltransferase is similar to: | PaperBLAST |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 61% id, 96% cov |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 60% id, 97% cov |
GLYA_METJA / Q58992: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-allo-threonine aldolase; EC 2.1.2.-; EC 4.1.2.49 from Methanocaldococcus jannaschii | 37% id, 92% cov |
| DVU1878: threonine aldolase, low-specificity is similar to: | PaperBLAST |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 45% id, 98% cov |
A0T1V9: low-specificity L-threonine aldolase (EC 4.1.2.48) from Sinorhizobium arboris | 39% id, 99% cov |
LTAA_AERJA / O07051: L-allo-threonine aldolase; L-allo-TA; L-allo-threonine acetaldehyde-lyase; EC 4.1.2.49 from Aeromonas jandaei | 26% id, 92% cov |
| DVU2143: fructose-1,6-bisphosphate aldolase, class II is similar to: | PaperBLAST |
GATY_KLEOX / Q8VS16: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Klebsiella oxytoca | 41% id, 100% cov |
gatY / Q65EY6: D-tagatose-bisphosphate aldolase (EC 4.1.2.40) from Bacillus licheniformis | 41% id, 96% cov |
KBAY_ECOLI / P0AB74: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 40% id, 99% cov |
| DVU0901: orotidine 5`-phosphate decarboxylase is similar to: | PaperBLAST |
HPS_MYCGS / Q9LBW4: 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase; EC 4.1.2.43 from Mycobacterium gastri | 27% id, 100% cov |
HPS_METAM / Q48907: 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase; EC 4.1.2.43 from Methylomonas aminofaciens | 27% id, 73% cov |
Q9F6B7: 3-hexulose-6-phosphate synthase (EC 4.1.2.43) from Aminomonas aminovorus | 42% id, 25% cov |
| DVU2362: thiamine-phosphate pyrophosphorylase is similar to: | PaperBLAST |
HPS_METAM / Q48907: 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase; EC 4.1.2.43 from Methylomonas aminofaciens | 25% id, 92% cov |
HPS_MYCGS / Q9LBW4: 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase; EC 4.1.2.43 from Mycobacterium gastri | 33% id, 67% cov |
Q9F6B7: 3-hexulose-6-phosphate synthase (EC 4.1.2.43) from Aminomonas aminovorus | 32% id, 58% cov |
| DVU1868: dihydrodipicolinate synthase is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 28% id, 77% cov |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 33% id, 51% cov |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 31% id, 51% cov |
| DVU0160: carbohydrate isomerase, KpsF/GutQ family is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 27% id, 46% cov |
| DVU1038: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase is similar to: | PaperBLAST |
DEOC_PSEU2 / Q4ZMV1: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Pseudomonas syringae | 58% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory