Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0663: cysteine synthase A
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

39% id,
100% cov

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

37% id,
99% cov

Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis

46% id,
65% cov

More...

DVU2774: CBS domain protein/ACT domain protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

40% id,
97% cov

CBS_YEAST / P32582: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; Sulfur transfer protein 4; EC 4.2.1.22 from Saccharomyces cerevisiae
CYS4 / P32582: Cys4 (EC 4.2.1.22) from Saccharomyces cerevisiae
P32582: cystathionine beta-synthase (EC 4.2.1.22) from Saccharomyces cerevisiae

34% id,
9% cov

DVU1044: inosine-5`-monophosphate dehydrogenase
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

27% id,
86% cov

DVU1911: CBS domain protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

36% id,
62% cov

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

41% id,
24% cov

DVU1850: CBS domain protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

33% id,
64% cov

DVU1653: polyA polymerase family protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

26% id,
62% cov

VIMSS11399203:
is similar to:
PaperBLAST

Q3TWN3: cystathionine beta-synthase (EC 4.2.1.22) from Mus musculus

35% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory