Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 7 curated entries in PaperBLAST's database that match '4.3.1.12'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3268: conserved hypothetical protein
is similar to:
PaperBLAST

agrE / Q8YMD9: arginine dihydrolase/ornithine cyclodeaminase (EC 4.3.1.12) from Nostoc sp.

40% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory